CRAN Package Check Results for Package Rz

Last updated on 2016-12-05 08:49:04.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9-1 10.63 69.98 80.61 NOTE
r-devel-linux-x86_64-debian-gcc 0.9-1 10.18 68.61 78.79 NOTE
r-devel-linux-x86_64-fedora-clang 0.9-1 168.45 NOTE --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 0.9-1 169.69 NOTE --no-stop-on-test-error
r-devel-macos-x86_64-clang 0.9-1 125.75 NOTE
r-devel-windows-ix86+x86_64 0.9-1 27.00 112.00 139.00 WARN
r-patched-linux-x86_64 0.9-1 10.46 65.66 76.12 NOTE
r-patched-solaris-sparc 0.9-1 943.70 NOTE
r-patched-solaris-x86 0.9-1 189.00 NOTE
r-release-linux-x86_64 0.9-1 10.55 65.36 75.91 NOTE
r-release-osx-x86_64-mavericks 0.9-1 WARN
r-release-windows-ix86+x86_64 0.9-1 40.00 154.00 194.00 NOTE
r-oldrel-windows-ix86+x86_64 0.9-1 26.00 119.00 145.00 NOTE

Check Details

Version: 0.9-1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘vcd’ in package code.
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
    Packages in Depends field not imported from:
     ‘foreign’ ‘ggplot2’ ‘grid’ ‘psych’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    Unexported object imported by a ':::' call: ‘foreign:::adQuote’
     See the note in ?`:::` about the use of this operator.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.9-1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     summary.CrossTable
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.9-1
Check: R code for possible problems
Result: NOTE
    calc.hist.breaks: no visible global function definition for
     ‘nclass.Sturges’
    calc.hist.breaks: no visible global function definition for ‘nclass.FD’
    calc.hist.breaks: no visible global function definition for
     ‘nclass.scott’
    check.class: no visible global function definition for ‘as.formula’
    gtkColorSelectionForPlotGetColor: no visible global function definition
     for ‘rgb’
    gtkColorSelectionWidgetNew: no visible global function definition for
     ‘colors’
    gtkFileChooserDialogFilteredActivate: no visible binding for global
     variable ‘theme_grey’
    localize: no visible global function definition for ‘localeToCharset’
    summary.CrossTable : twoDimTable: no visible global function definition
     for ‘addmargins’
    summary.CrossTable: no visible global function definition for
     ‘assocstats’
    write.spss: no visible global function definition for ‘write.table’
    write.stata: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     addmargins as.formula assocstats colors localeToCharset nclass.FD
     nclass.Sturges nclass.scott rgb theme_grey write.table
    Consider adding
     importFrom("grDevices", "colors", "nclass.FD", "nclass.Sturges",
     "nclass.scott", "rgb")
     importFrom("stats", "addmargins", "as.formula")
     importFrom("utils", "localeToCharset", "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.9-1
Flags: --no-stop-on-test-error
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘vcd’ in package code.
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
    Packages in Depends field not imported from:
     ‘foreign’ ‘ggplot2’ ‘grid’ ‘psych’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    Unexported object imported by a ':::' call: ‘foreign:::adQuote’
     See the note in ?`:::` about the use of this operator.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.9-1
Flags: --no-stop-on-test-error
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     summary.CrossTable
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.9-1
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    calc.hist.breaks: no visible global function definition for
     ‘nclass.Sturges’
    calc.hist.breaks: no visible global function definition for ‘nclass.FD’
    calc.hist.breaks: no visible global function definition for
     ‘nclass.scott’
    check.class: no visible global function definition for ‘as.formula’
    gtkColorSelectionForPlotGetColor: no visible global function definition
     for ‘rgb’
    gtkColorSelectionWidgetNew: no visible global function definition for
     ‘colors’
    gtkFileChooserDialogFilteredActivate: no visible binding for global
     variable ‘theme_grey’
    localize: no visible global function definition for ‘localeToCharset’
    summary.CrossTable : twoDimTable: no visible global function definition
     for ‘addmargins’
    summary.CrossTable: no visible global function definition for
     ‘assocstats’
    write.spss: no visible global function definition for ‘write.table’
    write.stata: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     addmargins as.formula assocstats colors localeToCharset nclass.FD
     nclass.Sturges nclass.scott rgb theme_grey write.table
    Consider adding
     importFrom("grDevices", "colors", "nclass.FD", "nclass.Sturges",
     "nclass.scott", "rgb")
     importFrom("stats", "addmargins", "as.formula")
     importFrom("utils", "localeToCharset", "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.9-1
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: S3 methods 'anova.merMod', 'as.data.frame.boot', 'as.data.frame.thpr', 'as.data.frame.VarCorr.merMod', 'as.function.merMod', 'coef.lmList4', 'coef.merMod', 'confint.lmList4', 'confint.merMod', 'confint.thpr', 'densityplot.thpr', 'deviance.merMod', 'df.residual.merMod', 'dotplot.coef.mer', 'dotplot.ranef.mer', 'drop1.merMod', 'extractAIC.merMod', 'family.glmResp', 'family.lmResp', 'family.merMod', 'family.nlsResp', 'fitted.merMod', 'fixef.merMod', 'formula.lmList4', 'formula.merMod', 'getME.merMod', 'hatvalues.merMod', 'isGLMM.merMod', 'isLMM.merMod', 'isNLMM.merMod', 'isREML.merMod', 'log.thpr', 'logLik.merMod', 'model.frame.merMod', 'model.matrix.merMod', 'ngrps.factor', 'ngrps.merMod', 'nobs.merMod', 'plot.coef.mer', 'plot.lmList4.confint', 'plot.merMod', 'plot.ranef.mer', 'predict.merMod', 'print.merMod', 'print.ranef.mer', 'print.summary.merMod', 'print.VarCorr.merMod', 'profile.merMod', 'qqmath.merMod', 'qqmath.ranef.mer', 'ranef.merMod', 'refit.merMod', 'refitML.merMod', 'residua [... truncated]
Flavor: r-devel-windows-ix86+x86_64

Version: 0.9-1
Check: R code for possible problems
Result: NOTE
    .onAttach: no visible global function definition for 'winMenuAdd'
    .onAttach: no visible global function definition for 'winMenuAddItem'
    calc.hist.breaks: no visible global function definition for
     'nclass.Sturges'
    calc.hist.breaks: no visible global function definition for 'nclass.FD'
    calc.hist.breaks: no visible global function definition for
     'nclass.scott'
    check.class: no visible global function definition for 'as.formula'
    gtkColorSelectionForPlotGetColor: no visible global function definition
     for 'rgb'
    gtkColorSelectionWidgetNew: no visible global function definition for
     'colors'
    gtkFileChooserDialogFilteredActivate: no visible binding for global
     variable 'theme_grey'
    localize: no visible global function definition for 'localeToCharset'
    summary.CrossTable : twoDimTable: no visible global function definition
     for 'addmargins'
    summary.CrossTable: no visible global function definition for
     'assocstats'
    write.spss: no visible global function definition for 'write.table'
    write.stata: no visible global function definition for 'write.table'
    Undefined global functions or variables:
     addmargins as.formula assocstats colors localeToCharset nclass.FD
     nclass.Sturges nclass.scott rgb theme_grey winMenuAdd winMenuAddItem
     write.table
    Consider adding
     importFrom("grDevices", "colors", "nclass.FD", "nclass.Sturges",
     "nclass.scott", "rgb")
     importFrom("stats", "addmargins", "as.formula")
     importFrom("utils", "localeToCharset", "winMenuAdd", "winMenuAddItem",
     "write.table")
    to your NAMESPACE file.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 0.9-1
Check: dependencies in R code
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key'library' or 'require' call to ‘vcd’ in package code.
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
    Packages in Depends field not imported from:
     ‘foreign’ ‘ggplot2’ ‘grid’ ‘psych’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    Unexported object imported by a ':::' call: ‘foreign:::adQuote’
     See the note in ?`:::` about the use of this operator.
Flavor: r-release-osx-x86_64-mavericks

Version: 0.9-1
Check: S3 generic/method consistency
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 0.9-1
Check: replacement functions
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavor: r-release-osx-x86_64-mavericks

Version: 0.9-1
Check: foreign function calls
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 0.9-1
Check: R code for possible problems
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 keycalc.hist.breaks: no visible global function definition for
     ‘nclass.Sturges’
    calc.hist.breaks: no visible global function definition for ‘nclass.FD’
    calc.hist.breaks: no visible global function definition for
     ‘nclass.scott’
    check.class: no visible global function definition for ‘as.formula’
    gtkColorSelectionForPlotGetColor: no visible global function definition
     for ‘rgb’
    gtkColorSelectionWidgetNew: no visible global function definition for
     ‘colors’
    gtkFileChooserDialogFilteredActivate: no visible binding for global
     variable ‘theme_grey’
    localize: no visible global function definition for ‘localeToCharset’
    summary.CrossTable : twoDimTable: no visible global function definition
     for ‘addmargins’
    summary.CrossTable: no visible global function definition for
     ‘assocstats’
    write.spss: no visible global function definition for ‘write.table’
    write.stata: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     addmargins as.formula assocstats colors localeToCharset nclass.FD
     nclass.Sturges nclass.scott rgb theme_grey write.table
    Consider adding
     importFrom("grDevices", "colors", "nclass.FD", "nclass.Sturges",
     "nclass.scott", "rgb")
     importFrom("stats", "addmargins", "as.formula")
     importFrom("utils", "localeToCharset", "write.table")
    to your NAMESPACE file.
Flavor: r-release-osx-x86_64-mavericks

Version: 0.9-1
Check: for missing documentation entries
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 0.9-1
Check: for code/documentation mismatches
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 0.9-1
Check: Rd \usage sections
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 0.9-1
Check: R code for possible problems
Result: NOTE
    gtkFileChooserDialogFilteredActivate: no visible binding for global
     variable 'theme_grey'
    summary.CrossTable: no visible global function definition for
     'assocstats'
Flavor: r-oldrel-windows-ix86+x86_64